Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 ELK2BP-201ENST00000415014 1224 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 KRT18P31-201ENST00000506277 1292 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AC091304.2-201ENST00000564639 760 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AL603832.2-201ENST00000566195 2125 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 AC024909.3-201ENST00000611513 2257 ntBASIC15.12■□□□□ 0.01
KRCC1Q9NPI7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 ARMC10P1-201ENST00000313754 855 ntBASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MIR648-201ENST00000385046 94 ntBASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PMS2P1-201ENST00000431037 1228 ntBASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PRELID1P1-202ENST00000567272 903 ntBASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 SBF1P1-201ENST00000444527 5631 ntBASIC15.11■□□□□ 0.01
KRCC1Q9NPI7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRCC1Q9NPI7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms