Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 AC005498.2-205ENST00000593218 784 ntBASIC15.24■□□□□ 0.03
MMP25Q9NPA2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP25Q9NPA2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AC055876.3-201ENST00000431496 288 ntBASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AC138649.4-201ENST00000612222 287 ntBASIC15.23■□□□□ 0.03
MMP25Q9NPA2 AC007967.4-201ENST00000614700 386 ntBASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MMP25Q9NPA2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 RNA5SP421-201ENST00000516864 134 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 AC069120.2-201ENST00000524091 540 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 SPCS2P1-201ENST00000561636 679 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 AL390955.2-201ENST00000603032 514 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 AL158211.3-201ENST00000607385 239 ntBASIC15.22■□□□□ 0.03
MMP25Q9NPA2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MMP25Q9NPA2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.21■□□□□ 0.03
MMP25Q9NPA2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms