Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC024909.3-201ENST00000611513 2257 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC015922.1-201ENST00000421102 1152 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 BASP1P1-201ENST00000430708 665 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 WASH4P-201ENST00000564273 1246 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 AC105021.1-202ENST00000570572 669 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 CETN4P-206ENST00000642099 2168 ntBASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.51□□□□□ -0.09
KIAA1549Q9HCM3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 AL589702.1-201ENST00000641229 1509 ntBASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 LINC01144-201ENST00000626198 1710 ntBASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
KIAA1549Q9HCM3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SPDYE18-201ENST00000510091 1050 ntBASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 KRT8P12-202ENST00000472924 1397 ntBASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KIAA1549Q9HCM3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms