Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AC098859.1-201ENST00000502915 1238 ntBASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19■□□□□ 0.63
VAT1LQ9HCJ6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 RNA5SP410-201ENST00000516285 106 ntBASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 LINC01144-201ENST00000626198 1710 ntBASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VAT1LQ9HCJ6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 SPDYE7P-202ENST00000420373 878 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 HMGN1P19-201ENST00000436976 333 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 CNN2P2-201ENST00000443536 909 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 CNN2P3-201ENST00000450201 906 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AC018529.1-201ENST00000613063 361 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AL136317.3-201ENST00000618497 906 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 AL662844.4-201ENST00000606367 2838 ntBASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.98■□□□□ 0.63
VAT1LQ9HCJ6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms