Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 RNU1-129P-201ENST00000384064 167 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PRSS29P-201ENST00000440800 595 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 FAAHP1-202ENST00000446499 1238 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 AL160237.2-201ENST00000556165 472 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 MIR4751-201ENST00000578027 74 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 U1.21-201ENST00000580816 167 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 AC021097.1-201ENST00000607902 574 ntBASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AC004870.1-201ENST00000315132 882 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 HMGA1P7-201ENST00000406908 502 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 CDC14C-201ENST00000428251 1719 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AC092910.1-201ENST00000482027 1129 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AC108751.1-201ENST00000490852 363 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AL592424.1-201ENST00000563624 1536 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 AL031055.1-201ENST00000606362 631 ntBASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRTM1Q9HBL6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 LINC02447-202ENST00000501888 2146 ntBASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms