Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 AL139011.1-202ENST00000642063 584 ntBASIC17.82■□□□□ 0.44
HIPK3Q9H422 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 AC134043.2-201ENST00000624206 2238 ntBASIC17.82■□□□□ 0.44
HIPK3Q9H422 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 AL512652.2-201ENST00000625156 1716 ntBASIC17.81■□□□□ 0.44
HIPK3Q9H422 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 BTNL10-201ENST00000595971 695 ntBASIC17.81■□□□□ 0.44
HIPK3Q9H422 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 AC010319.3-201ENST00000597028 470 ntBASIC17.81■□□□□ 0.44
HIPK3Q9H422 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.81■□□□□ 0.44
HIPK3Q9H422 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIPK3Q9H422 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 RARRES2P5-201ENST00000564013 466 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 MIR4538-201ENST00000581377 78 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 AC025048.3-201ENST00000590609 569 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 AC084346.2-201ENST00000607097 949 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 AC005702.4-201ENST00000618393 416 ntBASIC17.8■□□□□ 0.44
HIPK3Q9H422 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIPK3Q9H422 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HIPK3Q9H422 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms