Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 U1.21-201ENST00000580816 167 ntBASIC15.24■□□□□ 0.03
UBQLN3Q9H347 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AL009183.1-201ENST00000603760 355 ntBASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AP001350.2-201ENST00000625104 1094 ntBASIC15.24■□□□□ 0.03
UBQLN3Q9H347 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN3Q9H347 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 AL355306.1-201ENST00000415580 579 ntBASIC15.23■□□□□ 0.03
UBQLN3Q9H347 RPS8P6-201ENST00000426177 609 ntBASIC15.23■□□□□ 0.03
UBQLN3Q9H347 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN3Q9H347 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 CYP2A7P1-201ENST00000595391 815 ntBASIC15.22■□□□□ 0.03
UBQLN3Q9H347 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 AL513210.1-201ENST00000629608 234 ntBASIC15.22■□□□□ 0.03
UBQLN3Q9H347 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN3Q9H347 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms