Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.57■□□□□ 0.24
VPS11Q9H270 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.57■□□□□ 0.24
VPS11Q9H270 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 AC091167.2-201ENST00000579581 588 ntBASIC16.57■□□□□ 0.24
VPS11Q9H270 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.57■□□□□ 0.24
VPS11Q9H270 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 AL355877.3-201ENST00000622820 899 ntBASIC16.57■□□□□ 0.24
VPS11Q9H270 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 AF228730.7-201ENST00000641842 219 ntBASIC16.57■□□□□ 0.24
VPS11Q9H270 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 LINC02447-202ENST00000501888 2146 ntBASIC16.57■□□□□ 0.24
VPS11Q9H270 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 PCGF3-213ENST00000620529 1899 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC067930.6-201ENST00000623257 4947 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC013268.4-201ENST00000637413 2228 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 PMS2P1-201ENST00000431037 1228 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 FGFR3P6-201ENST00000457012 610 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS11Q9H270 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 SLC25A6P2-201ENST00000497974 877 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS11Q9H270 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC008608.2-201ENST00000606089 416 ntBASIC16.56■□□□□ 0.24
VPS11Q9H270 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS11Q9H270 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS11Q9H270 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS11Q9H270 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 REXO1L8P-201ENST00000604378 1897 ntBASIC16.55■□□□□ 0.24
VPS11Q9H270 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS11Q9H270 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VPS11Q9H270 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.55■□□□□ 0.24
VPS11Q9H270 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
VPS11Q9H270 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms