Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP28Q9H239 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.57□□□□□ -0.08
MMP28Q9H239 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP28Q9H239 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.57□□□□□ -0.08
MMP28Q9H239 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MMP28Q9H239 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MMP28Q9H239 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 AL592071.1-201ENST00000611956 408 ntBASIC14.57□□□□□ -0.08
MMP28Q9H239 AC124864.1-201ENST00000623408 392 ntBASIC14.57□□□□□ -0.08
MMP28Q9H239 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.57□□□□□ -0.08
MMP28Q9H239 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP28Q9H239 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MMP28Q9H239 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MMP28Q9H239 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.57□□□□□ -0.08
MMP28Q9H239 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
MMP28Q9H239 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 CHCHD2P8-201ENST00000429873 447 ntBASIC14.56□□□□□ -0.08
MMP28Q9H239 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.56□□□□□ -0.08
MMP28Q9H239 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP28Q9H239 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP28Q9H239 CICP14-201ENST00000629111 2732 ntBASIC14.56□□□□□ -0.08
MMP28Q9H239 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP28Q9H239 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP28Q9H239 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MMP28Q9H239 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
MMP28Q9H239 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP28Q9H239 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP28Q9H239 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP28Q9H239 TSSC2-201ENST00000450217 709 ntBASIC14.55□□□□□ -0.08
MMP28Q9H239 RN7SL606P-201ENST00000472779 293 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms