Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 GAS8-212ENST00000565062 1394 ntTSL 221.74■■□□□ 1.078e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-207ENST00000457572 1882 ntTSL 221.73■■□□□ 1.074e-11■□□□□ 10.8
XRN2Q9H0D6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.068e-6■□□□□ 10.8
XRN2Q9H0D6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.068e-6■□□□□ 10.8
XRN2Q9H0D6 PAXX-205ENST00000483807 705 ntTSL 521.57■■□□□ 1.048e-6■□□□□ 10.8
XRN2Q9H0D6 MTA1-214ENST00000494026 852 ntTSL 521.48■■□□□ 1.036e-7■□□□□ 10.8
XRN2Q9H0D6 C17orf62-217ENST00000578941 1079 ntTSL 1 (best)21.43■■□□□ 1.026e-7■□□□□ 10.8
XRN2Q9H0D6 C17orf62-226ENST00000582608 559 ntTSL 421.43■■□□□ 1.026e-7■□□□□ 10.8
XRN2Q9H0D6 GAS8-206ENST00000563980 546 ntTSL 421.33■■□□□ 1.018e-6■□□□□ 10.8
XRN2Q9H0D6 EDC4-211ENST00000575514 1016 ntTSL 521.24■□□□□ 0.998e-6■□□□□ 10.8
XRN2Q9H0D6 RHOT2-215ENST00000566965 879 ntTSL 521.14■□□□□ 0.974e-11■□□□□ 10.8
XRN2Q9H0D6 RNF123-204ENST00000443204 481 ntTSL 421.13■□□□□ 0.978e-6■□□□□ 10.8
XRN2Q9H0D6 AC104809.2-202ENST00000457369 800 ntTSL 321.06■□□□□ 0.968e-6■□□□□ 10.8
XRN2Q9H0D6 RBM33-209ENST00000440108 1027 ntTSL 521.02■□□□□ 0.961e-12■□□□□ 10.8
XRN2Q9H0D6 EDC4-204ENST00000572221 5267 ntTSL 221.02■□□□□ 0.958e-6■□□□□ 10.8
XRN2Q9H0D6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.948e-6■□□□□ 10.8
XRN2Q9H0D6 CDC37-202ENST00000588498 690 ntTSL 320.91■□□□□ 0.944e-11■□□□□ 10.8
XRN2Q9H0D6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.936e-7■□□□□ 10.8
XRN2Q9H0D6 PSME3-212ENST00000591722 537 ntTSL 220.88■□□□□ 0.938e-6■□□□□ 10.8
XRN2Q9H0D6 GAS8-217ENST00000568705 659 ntTSL 320.87■□□□□ 0.938e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.914e-11■□□□□ 10.8
XRN2Q9H0D6 C17orf62-222ENST00000582395 565 ntTSL 420.73■□□□□ 0.916e-7■□□□□ 10.8
XRN2Q9H0D6 POLG-224ENST00000637711 142 ntTSL 520.69■□□□□ 0.96e-7■□□□□ 10.8
XRN2Q9H0D6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.6■□□□□ 0.898e-6■□□□□ 10.8
XRN2Q9H0D6 RNF123-206ENST00000454491 531 ntTSL 420.48■□□□□ 0.878e-6■□□□□ 10.8
XRN2Q9H0D6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.868e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-201ENST00000546395 952 ntTSL 1 (best)20.44■□□□□ 0.868e-6■□□□□ 10.8
XRN2Q9H0D6 LTBP3-208ENST00000527339 619 ntTSL 320.41■□□□□ 0.868e-6■□□□□ 10.8
XRN2Q9H0D6 CCNY-209ENST00000493157 816 ntTSL 520.39■□□□□ 0.858e-6■□□□□ 10.8
XRN2Q9H0D6 RBM33-210ENST00000486747 559 ntTSL 320.35■□□□□ 0.851e-12■□□□□ 10.8
XRN2Q9H0D6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.33■□□□□ 0.858e-6■□□□□ 10.8
XRN2Q9H0D6 CDC37-203ENST00000588869 966 ntTSL 520.27■□□□□ 0.844e-11■□□□□ 10.8
XRN2Q9H0D6 GAS8-213ENST00000565957 549 ntTSL 420.16■□□□□ 0.828e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-229ENST00000583359 896 ntTSL 520.15■□□□□ 0.826e-7■□□□□ 10.8
XRN2Q9H0D6 MTA1-216ENST00000498644 871 ntTSL 220.12■□□□□ 0.816e-7■□□□□ 10.8
XRN2Q9H0D6 SGF29-206ENST00000567564 788 ntTSL 520.12■□□□□ 0.818e-6■□□□□ 10.8
XRN2Q9H0D6 KANSL3-211ENST00000452268 1448 ntTSL 520.11■□□□□ 0.818e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-207ENST00000577471 573 ntTSL 420.1■□□□□ 0.816e-7■□□□□ 10.8
XRN2Q9H0D6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.01■□□□□ 0.798e-6■□□□□ 10.8
XRN2Q9H0D6 XIAP-208ENST00000481776 598 ntTSL 519.98■□□□□ 0.798e-6■□□□□ 10.8
XRN2Q9H0D6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.791e-12■□□□□ 10.8
XRN2Q9H0D6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.798e-6■□□□□ 10.8
XRN2Q9H0D6 KRT8-208ENST00000547031 883 ntTSL 219.86■□□□□ 0.778e-6■□□□□ 10.8
XRN2Q9H0D6 PAXX-203ENST00000467845 744 ntTSL 219.8■□□□□ 0.768e-6■□□□□ 10.8
XRN2Q9H0D6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.766e-7■□□□□ 10.8
XRN2Q9H0D6 KANSL3-215ENST00000478492 543 ntTSL 419.79■□□□□ 0.768e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-204ENST00000577712 429 ntTSL 519.79■□□□□ 0.768e-6■□□□□ 10.8
XRN2Q9H0D6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.766e-7■□□□□ 10.8
XRN2Q9H0D6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.758e-6■□□□□ 10.8
XRN2Q9H0D6 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.71■□□□□ 0.758e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-213ENST00000578064 548 ntTSL 419.7■□□□□ 0.746e-7■□□□□ 10.8
XRN2Q9H0D6 PTPRA-206ENST00000430705 733 ntTSL 519.69■□□□□ 0.746e-7■□□□□ 10.8
XRN2Q9H0D6 COLCA2-207ENST00000639470 1207 ntTSL 1 (best)19.67■□□□□ 0.748e-6■□□□□ 10.8
XRN2Q9H0D6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.748e-6■□□□□ 10.8
XRN2Q9H0D6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.748e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-213ENST00000540398 641 ntTSL 319.64■□□□□ 0.738e-6■□□□□ 10.8
XRN2Q9H0D6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.55■□□□□ 0.728e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-225ENST00000582545 470 ntTSL 419.54■□□□□ 0.726e-7■□□□□ 10.8
XRN2Q9H0D6 PHF12-203ENST00000378879 2963 ntTSL 519.51■□□□□ 0.718e-6■□□□□ 10.8
XRN2Q9H0D6 PRR5-211ENST00000475850 1965 ntTSL 219.48■□□□□ 0.718e-6■□□□□ 10.8
XRN2Q9H0D6 EXOC3L4-202ENST00000559116 460 ntTSL 519.38■□□□□ 0.694e-11■□□□□ 10.8
XRN2Q9H0D6 PAXX-208ENST00000498095 1077 ntTSL 519.34■□□□□ 0.698e-6■□□□□ 10.8
XRN2Q9H0D6 ST13-204ENST00000455824 798 ntTSL 519.33■□□□□ 0.681e-15■□□□□ 10.8
XRN2Q9H0D6 PAXX-204ENST00000481187 794 ntTSL 319.32■□□□□ 0.688e-6■□□□□ 10.8
XRN2Q9H0D6 CCNY-207ENST00000490012 793 ntTSL 319.31■□□□□ 0.688e-6■□□□□ 10.8
XRN2Q9H0D6 HGS-204ENST00000571237 878 ntTSL 319.31■□□□□ 0.681e-9■□□□□ 10.8
XRN2Q9H0D6 RHOT2-213ENST00000565004 1014 ntTSL 519.3■□□□□ 0.683e-7■□□□□ 10.8
XRN2Q9H0D6 COPE-206ENST00000597026 678 ntTSL 219.29■□□□□ 0.688e-6■□□□□ 10.8
XRN2Q9H0D6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.22■□□□□ 0.678e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-215ENST00000542539 848 ntTSL 519.12■□□□□ 0.658e-6■□□□□ 10.8
XRN2Q9H0D6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.648e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.01■□□□□ 0.638e-6■□□□□ 10.8
XRN2Q9H0D6 AKT2-221ENST00000487537 954 ntTSL 218.97■□□□□ 0.638e-6■□□□□ 10.8
XRN2Q9H0D6 ALDH4A1-203ENST00000432718 844 ntTSL 318.91■□□□□ 0.628e-6■□□□□ 10.8
XRN2Q9H0D6 TNIP2-202ENST00000502256 923 ntTSL 218.91■□□□□ 0.628e-6■□□□□ 10.8
XRN2Q9H0D6 NDUFA13-205ENST00000511180 593 ntTSL 218.91■□□□□ 0.621e-9■□□□□ 10.8
XRN2Q9H0D6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.628e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-209ENST00000577707 534 ntTSL 418.86■□□□□ 0.616e-7■□□□□ 10.8
XRN2Q9H0D6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.84■□□□□ 0.618e-6■□□□□ 10.8
XRN2Q9H0D6 SGF29-207ENST00000569581 738 ntTSL 218.78■□□□□ 0.68e-6■□□□□ 10.8
XRN2Q9H0D6 SETD5-212ENST00000450326 921 ntTSL 318.65■□□□□ 0.581e-7■□□□□ 10.8
XRN2Q9H0D6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.56■□□□□ 0.566e-7■□□□□ 10.8
XRN2Q9H0D6 GAS8-203ENST00000537797 1080 ntTSL 218.55■□□□□ 0.568e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-212ENST00000577888 617 ntTSL 218.5■□□□□ 0.556e-7■□□□□ 10.8
XRN2Q9H0D6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.556e-7■□□□□ 10.8
XRN2Q9H0D6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.548e-6■□□□□ 10.8
XRN2Q9H0D6 EDC4-212ENST00000576972 747 ntTSL 318.38■□□□□ 0.538e-6■□□□□ 10.8
XRN2Q9H0D6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.531e-9■□□□□ 10.8
XRN2Q9H0D6 NDUFA13-202ENST00000502506 1166 ntTSL 218.3■□□□□ 0.521e-9■□□□□ 10.8
XRN2Q9H0D6 GYG2-207ENST00000469234 566 ntTSL 318.18■□□□□ 0.51e-9■□□□□ 10.8
XRN2Q9H0D6 TFEB-212ENST00000424495 377 ntTSL 1 (best)18.15■□□□□ 0.58e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.496e-7■□□□□ 10.8
XRN2Q9H0D6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.1■□□□□ 0.496e-7■□□□□ 10.8
XRN2Q9H0D6 CDC37-209ENST00000591248 1377 ntTSL 518.04■□□□□ 0.484e-11■□□□□ 10.8
XRN2Q9H0D6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.488e-6■□□□□ 10.8
XRN2Q9H0D6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18■□□□□ 0.478e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-218ENST00000545220 553 ntTSL 417.98■□□□□ 0.478e-6■□□□□ 10.8
XRN2Q9H0D6 C3-213ENST00000600744 708 ntTSL 517.97■□□□□ 0.476e-7■□□□□ 10.8
XRN2Q9H0D6 XIAP-211ENST00000497906 495 ntTSL 517.95■□□□□ 0.468e-6■□□□□ 10.8
XRN2Q9H0D6 ENGASE-209ENST00000584568 448 ntTSL 517.92■□□□□ 0.461e-12■□□□□ 10.8
Retrieved 100 of 21,068 protein–RNA pairs in 145.7 ms