Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
STRADBQ9C0K7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 NOC2LP2-201ENST00000407594 1944 ntBASIC15.51■□□□□ 0.07
STRADBQ9C0K7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 HLA-V-201ENST00000429037 534 ntBASIC15.51■□□□□ 0.07
STRADBQ9C0K7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 AC099568.2-201ENST00000609194 695 ntBASIC15.51■□□□□ 0.07
STRADBQ9C0K7 AC004461.2-201ENST00000629517 803 ntBASIC15.51■□□□□ 0.07
STRADBQ9C0K7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.51■□□□□ 0.07
STRADBQ9C0K7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 MYCLP2-201ENST00000449268 967 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 TIMM17BP1-201ENST00000545713 516 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AC132938.2-201ENST00000579188 680 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 MIR6805-201ENST00000615055 62 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AL591163.1-201ENST00000641757 987 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 AL109936.8-201ENST00000641772 604 ntBASIC15.5■□□□□ 0.07
STRADBQ9C0K7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
STRADBQ9C0K7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
STRADBQ9C0K7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms