Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 AL596087.1-201ENST00000400979 1969 ntBASIC15.15■□□□□ 0.02
TRIM2Q9C040 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 VN2R19P-201ENST00000442399 1052 ntBASIC15.15■□□□□ 0.02
TRIM2Q9C040 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 AL031432.2-201ENST00000566714 459 ntBASIC15.15■□□□□ 0.02
TRIM2Q9C040 AL928711.1-201ENST00000570165 459 ntBASIC15.15■□□□□ 0.02
TRIM2Q9C040 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM2Q9C040 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM2Q9C040 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 AC022188.1-201ENST00000620960 1664 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 MIR940-201ENST00000401276 94 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 CRYGEP-201ENST00000412192 528 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 RNA5SP415-201ENST00000517246 115 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 AC034105.1-201ENST00000563488 319 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 MIR3909-201ENST00000579518 119 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 Z83851.2-201ENST00000609564 659 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 PCDHA1-201ENST00000378133 2726 ntBASIC15.14■□□□□ 0.01
TRIM2Q9C040 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM2Q9C040 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRIM2Q9C040 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM2Q9C040 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM2Q9C040 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms