Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.88■□□□□ 0.77
RPAP1Q9BWH6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RPAP1Q9BWH6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 AC005225.4-201ENST00000557330 545 ntBASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPAP1Q9BWH6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 PCDHA1-201ENST00000378133 2726 ntBASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPAP1Q9BWH6 MTHFR-217ENST00000641820 1569 ntBASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AC004890.2-204ENST00000481968 304 ntBASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 LINC02560-201ENST00000596379 459 ntBASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AL035252.4-201ENST00000624174 288 ntBASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPAP1Q9BWH6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.84■□□□□ 0.77
RPAP1Q9BWH6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms