Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC005104.2-201ENST00000427818 678 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 TOB2P1-201ENST00000469761 992 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 TPSP2-201ENST00000561760 610 ntBASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.8□□□□□ -0.36
NDUFAF3Q9BU61 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 AC026396.1-201ENST00000419388 421 ntBASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 TSPY12P-201ENST00000421279 868 ntBASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 AC041040.2-201ENST00000622926 2899 ntBASIC12.79□□□□□ -0.36
NDUFAF3Q9BU61 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 CICP24-201ENST00000605464 2705 ntBASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
NDUFAF3Q9BU61 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms