Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC013467.2-201ENST00000605472 835 ntBASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AL031055.1-201ENST00000606362 631 ntBASIC11.49□□□□□ -0.57
UPK3BQ9BT76 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC026120.1-201ENST00000611536 926 ntBASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC105339.1-204ENST00000636249 355 ntBASIC11.49□□□□□ -0.57
UPK3BQ9BT76 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK3BQ9BT76 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AC092474.2-201ENST00000424288 719 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AL671277.1-201ENST00000429656 993 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MIR4492-201ENST00000581627 80 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AC021097.1-201ENST00000607902 574 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms