Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.15□□□□□ -0.14
NICN1Q9BSH3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NICN1Q9BSH3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NICN1Q9BSH3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NICN1Q9BSH3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.15□□□□□ -0.15
NICN1Q9BSH3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
NICN1Q9BSH3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 SLC22A20-204ENST00000530038 1673 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AC126177.1-201ENST00000547829 2218 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AP005117.1-202ENST00000581724 1908 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 PMS2P1-201ENST00000431037 1228 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AL589182.2-201ENST00000619332 1049 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AL139288.1-201ENST00000623748 933 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AP000550.4-202ENST00000639755 178 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AC023824.1-201ENST00000562945 2975 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 LINC02447-202ENST00000501888 2146 ntBASIC14.14□□□□□ -0.15
NICN1Q9BSH3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NICN1Q9BSH3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CDC14C-201ENST00000428251 1719 ntBASIC14.13□□□□□ -0.15
NICN1Q9BSH3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 KRT16P4-201ENST00000453883 522 ntBASIC14.13□□□□□ -0.15
NICN1Q9BSH3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.13□□□□□ -0.15
NICN1Q9BSH3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 AL732292.2-201ENST00000609649 430 ntBASIC14.13□□□□□ -0.15
NICN1Q9BSH3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms