Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CPNE1Q99829 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE1Q99829 HMGA1P7-201ENST00000406908 502 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 PMS2P4-201ENST00000412466 1052 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 PRSS29P-201ENST00000440800 595 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 CXCL1P1-201ENST00000502804 216 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.43■□□□□ 0.22
CPNE1Q99829 AL121912.1-201ENST00000603683 238 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 AL031055.1-201ENST00000606362 631 ntBASIC16.43■□□□□ 0.22
CPNE1Q99829 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE1Q99829 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CPNE1Q99829 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE1Q99829 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE1Q99829 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE1Q99829 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.42■□□□□ 0.22
CPNE1Q99829 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.42■□□□□ 0.22
CPNE1Q99829 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.42■□□□□ 0.22
CPNE1Q99829 AL645728.2-201ENST00000641974 660 ntBASIC16.42■□□□□ 0.22
CPNE1Q99829 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE1Q99829 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE1Q99829 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CPNE1Q99829 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE1Q99829 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE1Q99829 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE1Q99829 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 EMBP1-201ENST00000458200 901 ntBASIC16.41■□□□□ 0.22
CPNE1Q99829 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 AL031432.2-201ENST00000566714 459 ntBASIC16.41■□□□□ 0.22
CPNE1Q99829 AL928711.1-201ENST00000570165 459 ntBASIC16.41■□□□□ 0.22
CPNE1Q99829 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 AC117500.6-201ENST00000624871 588 ntBASIC16.41■□□□□ 0.22
CPNE1Q99829 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE1Q99829 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE1Q99829 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE1Q99829 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms