Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
EYA3Q99504 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EYA3Q99504 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.79■□□□□ 0.76
EYA3Q99504 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.79■□□□□ 0.76
EYA3Q99504 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.79■□□□□ 0.76
EYA3Q99504 AC022210.1-201ENST00000449856 793 ntBASIC19.79■□□□□ 0.76
EYA3Q99504 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.79■□□□□ 0.76
EYA3Q99504 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.79■□□□□ 0.76
EYA3Q99504 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.79■□□□□ 0.76
EYA3Q99504 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.79■□□□□ 0.76
EYA3Q99504 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.79■□□□□ 0.76
EYA3Q99504 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
EYA3Q99504 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.79■□□□□ 0.76
EYA3Q99504 TMEM261P1-201ENST00000604899 340 ntBASIC19.79■□□□□ 0.76
EYA3Q99504 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EYA3Q99504 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.79■□□□□ 0.76
EYA3Q99504 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.79■□□□□ 0.76
EYA3Q99504 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
EYA3Q99504 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
EYA3Q99504 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.79■□□□□ 0.76
EYA3Q99504 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
EYA3Q99504 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EYA3Q99504 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
EYA3Q99504 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EYA3Q99504 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
EYA3Q99504 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
EYA3Q99504 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.78■□□□□ 0.76
EYA3Q99504 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.78■□□□□ 0.76
EYA3Q99504 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
EYA3Q99504 AC007389.4-201ENST00000454674 793 ntBASIC19.78■□□□□ 0.76
EYA3Q99504 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.78■□□□□ 0.76
EYA3Q99504 AL365330.1-201ENST00000607459 531 ntBASIC19.78■□□□□ 0.76
EYA3Q99504 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.78■□□□□ 0.76
EYA3Q99504 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.78■□□□□ 0.76
EYA3Q99504 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 AC106820.2-201ENST00000563775 3264 ntBASIC19.78■□□□□ 0.76
EYA3Q99504 AC006538.1-201ENST00000567905 1585 ntBASIC19.78■□□□□ 0.76
EYA3Q99504 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EYA3Q99504 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 AC098850.1-201ENST00000419919 790 ntBASIC19.77■□□□□ 0.76
EYA3Q99504 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.77■□□□□ 0.76
EYA3Q99504 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.77■□□□□ 0.76
EYA3Q99504 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.77■□□□□ 0.76
EYA3Q99504 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.77■□□□□ 0.76
EYA3Q99504 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.77■□□□□ 0.76
EYA3Q99504 AC025048.3-201ENST00000590609 569 ntBASIC19.77■□□□□ 0.76
EYA3Q99504 AC005702.4-201ENST00000618393 416 ntBASIC19.77■□□□□ 0.76
EYA3Q99504 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EYA3Q99504 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
EYA3Q99504 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.77■□□□□ 0.76
EYA3Q99504 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
EYA3Q99504 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.77■□□□□ 0.75
EYA3Q99504 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EYA3Q99504 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EYA3Q99504 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.76■□□□□ 0.75
EYA3Q99504 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EYA3Q99504 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EYA3Q99504 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EYA3Q99504 PCGF3-213ENST00000620529 1899 ntBASIC19.76■□□□□ 0.75
EYA3Q99504 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EYA3Q99504 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms