Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP1S3Q96PC3 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AC092384.3-202ENST00000564646 2873 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 STARP1-201ENST00000397973 869 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 SPDYE15P-201ENST00000424157 909 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 COX11P1-201ENST00000489116 835 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 MIR4497-201ENST00000583208 89 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 AL138966.2-201ENST00000621997 464 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 CICP4-201ENST00000447359 2812 ntBASIC12.49□□□□□ -0.41
AP1S3Q96PC3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP1S3Q96PC3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 AC092171.3-201ENST00000610122 2651 ntBASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TUBB8P12-201ENST00000308911 1335 ntBASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TUBB7P-202ENST00000428444 1305 ntBASIC12.48□□□□□ -0.41
AP1S3Q96PC3 TUBB8P7-204ENST00000567960 1332 ntBASIC12.48□□□□□ -0.41
AP1S3Q96PC3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms