Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC46A1Q96NT5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
SLC46A1Q96NT5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AL512384.1-201ENST00000406683 331 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AC022494.1-201ENST00000466044 728 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AC011495.1-201ENST00000498085 584 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AC017083.2-201ENST00000608069 979 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AL162274.1-201ENST00000617191 1098 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 IGHV3-72-202ENST00000621503 303 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AC022211.2-201ENST00000585075 2527 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 AD000864.1-201ENST00000624076 2295 ntBASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SLC46A1Q96NT5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 BANF1P1-201ENST00000553684 263 ntBASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 AC010336.2-201ENST00000564226 506 ntBASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 AL139011.1-202ENST00000642063 584 ntBASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 PRORSD1P-202ENST00000563365 2154 ntBASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC46A1Q96NT5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 AL645728.1-201ENST00000366221 2101 ntBASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC46A1Q96NT5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms