Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC58Q96CX6 AC005622.1-201ENST00000636801 1703 ntBASIC15.65■□□□□ 0.1
LRRC58Q96CX6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 IER3-202ENST00000376377 1350 ntBASIC15.65■□□□□ 0.1
LRRC58Q96CX6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.65■□□□□ 0.1
LRRC58Q96CX6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AC004706.3-202ENST00000621574 984 ntBASIC15.65■□□□□ 0.1
LRRC58Q96CX6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC58Q96CX6 AC099063.4-201ENST00000641099 1602 ntBASIC15.65■□□□□ 0.1
LRRC58Q96CX6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
LRRC58Q96CX6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 SSR4P1-203ENST00000599569 2260 ntBASIC15.64■□□□□ 0.09
LRRC58Q96CX6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 AC107918.2-201ENST00000530817 355 ntBASIC15.64■□□□□ 0.09
LRRC58Q96CX6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.64■□□□□ 0.09
LRRC58Q96CX6 NPAP1P7-201ENST00000613027 823 ntBASIC15.64■□□□□ 0.09
LRRC58Q96CX6 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC58Q96CX6 AC023157.3-201ENST00000619086 2088 ntBASIC15.64■□□□□ 0.09
LRRC58Q96CX6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms