Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC016027.1-202ENST00000607927 1699 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 HNRNPA1P28-201ENST00000424481 961 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 AL591424.1-201ENST00000442569 1213 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC093724.1-201ENST00000448659 1027 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC074386.1-202ENST00000463561 864 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 KRT18P34-201ENST00000488218 1270 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 RNA5SP416-201ENST00000516838 111 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC140113.2-201ENST00000604370 208 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC068137.2-201ENST00000605408 478 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 FAM197Y3-203ENST00000618346 717 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 AL513190.1-201ENST00000621254 727 ntBASIC16■□□□□ 0.15
RHBDF1Q96CC6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16■□□□□ 0.15
RHBDF1Q96CC6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RHBDF1Q96CC6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AL596257.1-201ENST00000641463 2694 ntBASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 MED15P5-201ENST00000423150 992 ntBASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 KRT18P3-201ENST00000451602 1288 ntBASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AC092865.6-201ENST00000642101 219 ntBASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RHBDF1Q96CC6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 AP002472.1-201ENST00000577490 586 ntBASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RHBDF1Q96CC6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 732.5 ms