Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 TSSK5P-201ENST00000423978 907 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 RNA5SP410-201ENST00000516285 106 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AC012645.4-201ENST00000610691 1061 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 AL353705.2-201ENST00000428243 662 ntBASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 POU5F1P6-201ENST00000466990 990 ntBASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 AC005225.4-201ENST00000557330 545 ntBASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP6V0A1Q93050 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 AC005622.1-201ENST00000636801 1703 ntBASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 FLJ38576-201ENST00000623820 2459 ntBASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 AC244107.1-201ENST00000442033 332 ntBASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 HLA-V-204ENST00000476601 1289 ntBASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.29■□□□□ 0.52
ATP6V0A1Q93050 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms