Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 FLJ16779-201ENST00000612722 7638 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AP005117.1-202ENST00000581724 1908 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 DBET-201ENST00000630918 3363 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 KLF4P1-201ENST00000412782 1185 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 OR7E14P-202ENST00000530490 1290 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 MTDHP4-201ENST00000600287 670 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 FAM215A-202ENST00000632077 792 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 AC010491.1-201ENST00000563101 2797 ntBASIC14.51□□□□□ -0.09
RAB40AQ8WXH6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AL022342.1-201ENST00000400363 863 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AC120114.3-201ENST00000611923 658 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AC073592.4-201ENST00000623827 446 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AL022326.1-202ENST00000641533 845 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 AC006277.1-201ENST00000624348 1610 ntBASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40AQ8WXH6 KRT8P49-201ENST00000604166 1432 ntBASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB40AQ8WXH6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms