Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL590787.1-201ENST00000568856 1315 ntBASIC13.9□□□□□ -0.19
RTN4IP1Q8WWV3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AC023824.1-201ENST00000562945 2975 ntBASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 AC144831.1-201ENST00000573312 2656 ntBASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTN4IP1Q8WWV3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AC004870.1-201ENST00000315132 882 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 LAGE3P1-201ENST00000425356 484 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 RN7SL510P-201ENST00000581311 263 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AL121912.1-201ENST00000603683 238 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AC004706.3-202ENST00000621574 984 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AL691432.3-201ENST00000621860 400 ntBASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RTN4IP1Q8WWV3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTN4IP1Q8WWV3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms