Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGB4Q8WW32 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 WASH4P-201ENST00000564273 1246 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CHCHD2P3-201ENST00000603038 451 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 IGHV3-72-202ENST00000621503 303 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AC007431.3-201ENST00000623221 587 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AL139011.1-202ENST00000642063 584 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 AC099398.1-201ENST00000567919 2776 ntBASIC16.4■□□□□ 0.22
HMGB4Q8WW32 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGB4Q8WW32 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGB4Q8WW32 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGB4Q8WW32 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HMGB4Q8WW32 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AC141586.5-201ENST00000624546 2050 ntBASIC16.39■□□□□ 0.21
HMGB4Q8WW32 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AL645728.1-201ENST00000366221 2101 ntBASIC16.39■□□□□ 0.21
HMGB4Q8WW32 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 HILS1-202ENST00000545329 423 ntBASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AC061975.2-201ENST00000581722 295 ntBASIC16.39■□□□□ 0.21
HMGB4Q8WW32 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 AL033527.5-202ENST00000641632 1098 ntBASIC16.39■□□□□ 0.21
HMGB4Q8WW32 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HMGB4Q8WW32 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms