Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 INGX-201ENST00000359239 846 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MIR648-201ENST00000385046 94 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 GRK6P1-201ENST00000400595 1711 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AL390955.1-201ENST00000428694 934 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 FITM1-202ENST00000559294 800 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AP003071.4-201ENST00000562276 1284 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AL353593.2-201ENST00000602529 1483 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AL359736.2-201ENST00000621992 437 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 AL031731.1-201ENST00000642131 2094 ntBASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SMIM11BQ8TCY0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 LINC01101-201ENST00000622953 1884 ntBASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 AC003669.1-201ENST00000334569 611 ntBASIC10.7□□□□□ -0.7
SMIM11BQ8TCY0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms