Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 RN7SL399P-201ENST00000471648 279 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 FTH1P14-201ENST00000482930 551 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 IQSEC3P1-201ENST00000538799 536 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AP006547.1-201ENST00000563435 692 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 EEF1DP1-201ENST00000585891 896 ntBASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPATA3Q8NHX4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC007969.1-201ENST00000433675 447 ntBASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC026979.3-201ENST00000607315 403 ntBASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC097724.1-201ENST00000609581 426 ntBASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 AC133963.1-201ENST00000504166 1679 ntBASIC12.73□□□□□ -0.37
SPATA3Q8NHX4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms