Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 AC116407.3-201ENST00000623905 1129 ntBASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP61Q8NHU2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 KRT18P27-201ENST00000427733 1299 ntBASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 RPS15P9-201ENST00000494093 319 ntBASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 AC005593.1-201ENST00000624894 515 ntBASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CFAP61Q8NHU2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 FDX1P1-201ENST00000449115 551 ntBASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 RNA5SP419-201ENST00000515908 135 ntBASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 AC124947.2-201ENST00000547118 1133 ntBASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CFAP61Q8NHU2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CFAP61Q8NHU2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CFAP61Q8NHU2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CFAP61Q8NHU2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CFAP61Q8NHU2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms