Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 NKILA-202ENST00000614771 2598 ntBASIC17.6■□□□□ 0.41
BEST2Q8NFU1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 MIR943-201ENST00000401286 94 ntBASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.6■□□□□ 0.41
BEST2Q8NFU1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BEST2Q8NFU1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC069120.2-201ENST00000524091 540 ntBASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AC092364.2-202ENST00000597012 1073 ntBASIC17.59■□□□□ 0.41
BEST2Q8NFU1 AL365330.1-201ENST00000607459 531 ntBASIC17.59■□□□□ 0.41
BEST2Q8NFU1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 PCDHA12-202ENST00000613593 2588 ntBASIC17.59■□□□□ 0.41
BEST2Q8NFU1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BEST2Q8NFU1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST2Q8NFU1 AL035456.1-201ENST00000456064 1369 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 AC055876.3-201ENST00000431496 288 ntBASIC17.58■□□□□ 0.4
BEST2Q8NFU1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST2Q8NFU1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms