Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KRT18P34-201ENST00000488218 1270 ntBASIC15.39■□□□□ 0.05
NUP43Q8NFH3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 AC140113.2-201ENST00000604370 208 ntBASIC15.39■□□□□ 0.05
NUP43Q8NFH3 AC027601.4-201ENST00000611259 610 ntBASIC15.39■□□□□ 0.05
NUP43Q8NFH3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NUP43Q8NFH3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MED15P5-201ENST00000423150 992 ntBASIC15.38■□□□□ 0.05
NUP43Q8NFH3 AL591424.1-201ENST00000442569 1213 ntBASIC15.38■□□□□ 0.05
NUP43Q8NFH3 KRT18P3-201ENST00000451602 1288 ntBASIC15.38■□□□□ 0.05
NUP43Q8NFH3 AC074386.1-202ENST00000463561 864 ntBASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
NUP43Q8NFH3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms