Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 AC092183.1-201ENST00000469884 875 ntBASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 PDPK2P-202ENST00000562415 1191 ntBASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 AL031055.1-201ENST00000606362 631 ntBASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ME2P1-201ENST00000426028 1970 ntBASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 GPAA1P2-202ENST00000606848 1787 ntBASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIMC1Q8NDZ2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.51■□□□□ 0.07
SIMC1Q8NDZ2 TSPY26P-202ENST00000565928 3884 ntBASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SIMC1Q8NDZ2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms