Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 AC007950.2-201ENST00000615045 2347 ntBASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LSMEM1Q8N8F7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.08■□□□□ 0.01
LSMEM1Q8N8F7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LSMEM1Q8N8F7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AL365203.3-201ENST00000609742 2057 ntBASIC15.07■□□□□ 0
LSMEM1Q8N8F7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AC109635.5-201ENST00000533593 962 ntBASIC15.07■□□□□ 0
LSMEM1Q8N8F7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 Z83851.2-201ENST00000609564 659 ntBASIC15.07■□□□□ 0
LSMEM1Q8N8F7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AC105917.1-201ENST00000506637 2539 ntBASIC15.07■□□□□ 0
LSMEM1Q8N8F7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 CICP13-201ENST00000422015 2789 ntBASIC15.07■□□□□ 0
LSMEM1Q8N8F7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LSMEM1Q8N8F7 AC024909.3-201ENST00000611513 2257 ntBASIC15.06■□□□□ 0
LSMEM1Q8N8F7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms