Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 AC097493.3-201ENST00000509725 367 ntBASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 MIR4453-201ENST00000584019 89 ntBASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 AC013467.2-201ENST00000605472 835 ntBASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PHTF2Q8N3S3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 AC069120.2-201ENST00000524091 540 ntBASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 AL390754.1-201ENST00000619088 582 ntBASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 AC006449.5-201ENST00000610658 2098 ntBASIC16.97■□□□□ 0.31
PHTF2Q8N3S3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 TUBB7P-202ENST00000428444 1305 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 KRT18P34-201ENST00000488218 1270 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 RARRES2P9-201ENST00000565168 469 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 RN7SL204P-201ENST00000582831 262 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 SNX33P1-201ENST00000592116 1762 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PHTF2Q8N3S3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 AC006277.1-201ENST00000624348 1610 ntBASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PHTF2Q8N3S3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHTF2Q8N3S3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms