Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 PTCHD3P3-201ENST00000403073 906 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ATP5G2P1-201ENST00000433580 426 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 AC006557.2-201ENST00000592985 1240 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 NPAP1P7-201ENST00000613027 823 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 AP000550.4-202ENST00000639755 178 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 SCARNA2-201ENST00000458748 420 ntBASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 SLC25A6P2-201ENST00000497974 877 ntBASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AC107918.2-201ENST00000530817 355 ntBASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AC069148.1-201ENST00000608741 768 ntBASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LINC01561Q8N1V8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.05□□□□□ -0.64
LINC01561Q8N1V8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms