Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 AL589987.1-201ENST00000453380 819 ntBASIC17.68■□□□□ 0.42
HERC6Q8IVU3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 SNX29P1-201ENST00000548357 1007 ntBASIC17.68■□□□□ 0.42
HERC6Q8IVU3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 AC093726.1-201ENST00000608064 963 ntBASIC17.68■□□□□ 0.42
HERC6Q8IVU3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
HERC6Q8IVU3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 SPDYE17-201ENST00000412399 783 ntBASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 FAM8A2P-201ENST00000528813 1142 ntBASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC024267.1-201ENST00000582320 895 ntBASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AL109936.8-201ENST00000641772 604 ntBASIC17.67■□□□□ 0.42
HERC6Q8IVU3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HERC6Q8IVU3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 AC026979.3-201ENST00000607315 403 ntBASIC17.66■□□□□ 0.42
HERC6Q8IVU3 WFDC1-204ENST00000613603 549 ntBASIC17.66■□□□□ 0.42
HERC6Q8IVU3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.66■□□□□ 0.42
HERC6Q8IVU3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms