Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00346Q8IVM7 AC024909.3-201ENST00000611513 2257 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 PRSS29P-201ENST00000440800 595 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 AC009947.1-201ENST00000444350 727 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 RNA5SP419-201ENST00000515908 135 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 HYMAI-201ENST00000635591 3347 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00346Q8IVM7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 TSPY26P-202ENST00000565928 3884 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 HMGA1P7-201ENST00000406908 502 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 CRYGEP-201ENST00000412192 528 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 VN2R19P-201ENST00000442399 1052 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 POU5F1P6-201ENST00000466990 990 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 RNA5SP415-201ENST00000517246 115 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 SLC25A6P4-201ENST00000586535 553 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 AC020765.3-201ENST00000613051 740 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 AC010491.1-201ENST00000563101 2797 ntBASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00346Q8IVM7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00346Q8IVM7 AC022188.1-201ENST00000620960 1664 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms