Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SPDYE21P-201ENST00000413323 827 ntBASIC14.68□□□□□ -0.06
LRRC28Q86X40 AL031284.1-201ENST00000419297 478 ntBASIC14.68□□□□□ -0.06
LRRC28Q86X40 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 AC148477.8-201ENST00000624298 468 ntBASIC14.68□□□□□ -0.06
LRRC28Q86X40 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LRRC28Q86X40 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LRRC28Q86X40 AC013268.4-201ENST00000637413 2228 ntBASIC14.68□□□□□ -0.06
LRRC28Q86X40 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 GGT4P-201ENST00000623672 1708 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC132938.5-201ENST00000624980 1813 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC003669.1-201ENST00000334569 611 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AL020989.1-201ENST00000422979 469 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC093909.1-201ENST00000504731 1122 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 RNA5SP419-201ENST00000515908 135 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 MTDHP4-201ENST00000600287 670 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 AL022326.1-202ENST00000641533 845 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LRRC28Q86X40 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LRRC28Q86X40 TNRC18P2-201ENST00000417666 2714 ntBASIC14.67□□□□□ -0.06
LRRC28Q86X40 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms