Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZFHX4Q86UP3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZFHX4Q86UP3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 PGAM1P5-201ENST00000548011 764 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 CU633904.3-201ENST00000624042 1029 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 GGT4P-201ENST00000623672 1708 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AL031731.1-201ENST00000642131 2094 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 AC010234.1-201ENST00000494599 870 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 CTBP2P4-201ENST00000513884 920 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 UBALD1-205ENST00000590891 2641 ntBASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.11■□□□□ 0.01
ZFHX4Q86UP3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.1■□□□□ 0.01
ZFHX4Q86UP3 AC125604.1-201ENST00000496255 707 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms