Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 UXT-AS1-201ENST00000590504 1525 ntBASIC15.75■□□□□ 0.11
RNF44Q7L0R7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 LINC01144-201ENST00000626198 1710 ntBASIC15.75■□□□□ 0.11
RNF44Q7L0R7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 FAM58DP-201ENST00000428076 619 ntBASIC15.75■□□□□ 0.11
RNF44Q7L0R7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AC093724.1-201ENST00000448659 1027 ntBASIC15.75■□□□□ 0.11
RNF44Q7L0R7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 AC011676.5-201ENST00000624864 2660 ntBASIC15.74■□□□□ 0.11
RNF44Q7L0R7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 TSEN15P1-201ENST00000423257 515 ntBASIC15.74■□□□□ 0.11
RNF44Q7L0R7 GPS2P2-201ENST00000430745 888 ntBASIC15.74■□□□□ 0.11
RNF44Q7L0R7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 SLC25A39P2-201ENST00000537614 270 ntBASIC15.74■□□□□ 0.11
RNF44Q7L0R7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF44Q7L0R7 FOXO1B-201ENST00000504678 1527 ntBASIC15.73■□□□□ 0.11
RNF44Q7L0R7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 NKILA-202ENST00000614771 2598 ntBASIC15.73■□□□□ 0.11
RNF44Q7L0R7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.73■□□□□ 0.11
RNF44Q7L0R7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF44Q7L0R7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF44Q7L0R7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF44Q7L0R7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF44Q7L0R7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms