Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTR9Q6PD62 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CTR9Q6PD62 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 MIR943-201ENST00000401286 94 ntBASIC19.46■□□□□ 0.71
CTR9Q6PD62 AC107890.1-201ENST00000422478 521 ntBASIC19.46■□□□□ 0.71
CTR9Q6PD62 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 AC140878.1-201ENST00000565277 250 ntBASIC19.46■□□□□ 0.71
CTR9Q6PD62 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CTR9Q6PD62 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTR9Q6PD62 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ALOX12P2-203ENST00000570921 1945 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 AC055876.3-201ENST00000431496 288 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 RNA5SP410-201ENST00000516285 106 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 AC138649.4-201ENST00000612222 287 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 AC007967.4-201ENST00000614700 386 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 NKILA-202ENST00000614771 2598 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 AC005052.1-201ENST00000625181 2492 ntBASIC19.45■□□□□ 0.7
CTR9Q6PD62 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.45■□□□□ 0.7
CTR9Q6PD62 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTR9Q6PD62 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 FO538757.1-201ENST00000623083 1397 ntBASIC19.44■□□□□ 0.7
CTR9Q6PD62 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 TREML5P-201ENST00000421694 576 ntBASIC19.44■□□□□ 0.7
CTR9Q6PD62 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTR9Q6PD62 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.44■□□□□ 0.7
CTR9Q6PD62 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms