Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 AGGF1P2-201ENST00000426656 2106 ntBASIC14.83□□□□□ -0.04
RTL6Q6ICC9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RTL6Q6ICC9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 UGT1A2P-201ENST00000454886 866 ntBASIC14.82□□□□□ -0.04
RTL6Q6ICC9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RTL6Q6ICC9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 MIR661-201ENST00000384842 89 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 KRT18P34-201ENST00000488218 1270 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC097493.3-201ENST00000509725 367 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 MIR4453-201ENST00000584019 89 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC073389.1-201ENST00000595595 795 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 AL158211.3-201ENST00000607385 239 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TUBB8P12-201ENST00000308911 1335 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TUBB7P-202ENST00000428444 1305 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 TUBB8P7-204ENST00000567960 1332 ntBASIC14.81□□□□□ -0.04
RTL6Q6ICC9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RTL6Q6ICC9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms