Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 AL592424.1-201ENST00000563624 1536 ntBASIC19.63■□□□□ 0.73
RNF20Q5VTR2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 PCDHA1-201ENST00000378133 2726 ntBASIC19.63■□□□□ 0.73
RNF20Q5VTR2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 AC092919.2-201ENST00000623631 1645 ntBASIC19.62■□□□□ 0.73
RNF20Q5VTR2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF20Q5VTR2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 AC002056.1-201ENST00000395613 760 ntBASIC19.61■□□□□ 0.73
RNF20Q5VTR2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 AC016027.1-202ENST00000607927 1699 ntBASIC19.61■□□□□ 0.73
RNF20Q5VTR2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF20Q5VTR2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 WASH6P-202ENST00000359512 1437 ntBASIC19.6■□□□□ 0.73
RNF20Q5VTR2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF20Q5VTR2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms