Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 TNRC18P2-201ENST00000417666 2714 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AP002383.4-201ENST00000442518 975 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AC087163.2-201ENST00000457299 853 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 MIR5100-201ENST00000579544 119 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AP002414.4-201ENST00000589764 1148 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AL139424.1-201ENST00000607572 797 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 AC020765.3-201ENST00000613051 740 ntBASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00242Q5T6M2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AP005117.1-201ENST00000584346 1413 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AL031133.1-201ENST00000406807 723 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AC104819.1-201ENST00000504587 486 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 LINC01023-201ENST00000606054 436 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AL022326.1-202ENST00000641533 845 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 SLC22A20-204ENST00000530038 1673 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 AC023157.3-201ENST00000619086 2088 ntBASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC00242Q5T6M2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC00242Q5T6M2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms