Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 AC024267.1-201ENST00000582320 895 ntBASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 AC007967.4-201ENST00000614700 386 ntBASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MS4A13Q5J8X5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 AC107890.1-201ENST00000422478 521 ntBASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 AC140878.1-201ENST00000565277 250 ntBASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 AL365330.1-201ENST00000607459 531 ntBASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MS4A13Q5J8X5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AL353705.2-201ENST00000428243 662 ntBASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 HMGN1P19-201ENST00000436976 333 ntBASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 AC099398.1-201ENST00000567919 2776 ntBASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms