Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GCNT1Q02742 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNT1Q02742 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 ELL2P1-201ENST00000413990 1906 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
GCNT1Q02742 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.49■□□□□ 0.39
GCNT1Q02742 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GCNT1Q02742 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 MIR346-201ENST00000362234 95 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.49■□□□□ 0.39
GCNT1Q02742 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 SPCS2P4-201ENST00000436160 681 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 SPDYE11-202ENST00000450699 704 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 AC079140.1-201ENST00000508039 487 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 YBX1P5-201ENST00000509441 847 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 KRT8P48-201ENST00000515599 1220 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.49■□□□□ 0.39
GCNT1Q02742 KRT8P23-201ENST00000560090 1207 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 LINC01225-203ENST00000563550 1244 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.49■□□□□ 0.39
GCNT1Q02742 AC005829.1-201ENST00000570002 483 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 SPDYE9P-201ENST00000570642 692 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 MIR4321-201ENST00000592276 80 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 SPDYE10P-202ENST00000612005 668 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 SPDYE8P-202ENST00000612377 668 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.49■□□□□ 0.39
GCNT1Q02742 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.49■□□□□ 0.39
GCNT1Q02742 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.49■□□□□ 0.39
GCNT1Q02742 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
GCNT1Q02742 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.49■□□□□ 0.39
GCNT1Q02742 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCNT1Q02742 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.48■□□□□ 0.39
GCNT1Q02742 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GCNT1Q02742 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.48■□□□□ 0.39
GCNT1Q02742 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.48■□□□□ 0.39
GCNT1Q02742 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.48■□□□□ 0.39
GCNT1Q02742 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GCNT1Q02742 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.48■□□□□ 0.39
GCNT1Q02742 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GCNT1Q02742 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 SPTSSB-204ENST00000617024 1292 ntBASIC17.48■□□□□ 0.39
GCNT1Q02742 AC084121.4-201ENST00000641598 221 ntBASIC17.48■□□□□ 0.39
GCNT1Q02742 AF228730.8-201ENST00000642140 221 ntBASIC17.48■□□□□ 0.39
GCNT1Q02742 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.48■□□□□ 0.39
GCNT1Q02742 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCNT1Q02742 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.48■□□□□ 0.39
GCNT1Q02742 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GCNT1Q02742 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCNT1Q02742 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCNT1Q02742 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.47■□□□□ 0.39
GCNT1Q02742 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.47■□□□□ 0.39
GCNT1Q02742 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
GCNT1Q02742 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
GCNT1Q02742 CDC14C-201ENST00000428251 1719 ntBASIC17.47■□□□□ 0.39
GCNT1Q02742 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GCNT1Q02742 AC069224.1-201ENST00000566372 1715 ntBASIC17.47■□□□□ 0.39
GCNT1Q02742 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms