Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNA1P78396 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNA1P78396 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.54■□□□□ 0.56
CCNA1P78396 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNA1P78396 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.54■□□□□ 0.56
CCNA1P78396 AC025048.3-201ENST00000590609 569 ntBASIC18.54■□□□□ 0.56
CCNA1P78396 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCNA1P78396 AC005702.4-201ENST00000618393 416 ntBASIC18.54■□□□□ 0.56
CCNA1P78396 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCNA1P78396 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCNA1P78396 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 U82695.1-201ENST00000635752 1889 ntBASIC18.54■□□□□ 0.56
CCNA1P78396 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCNA1P78396 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNA1P78396 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.54■□□□□ 0.56
CCNA1P78396 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCNA1P78396 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNA1P78396 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCNA1P78396 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNA1P78396 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNA1P78396 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNA1P78396 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.53■□□□□ 0.56
CCNA1P78396 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.53■□□□□ 0.56
CCNA1P78396 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNA1P78396 RARRES2P5-201ENST00000564013 466 ntBASIC18.53■□□□□ 0.56
CCNA1P78396 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.53■□□□□ 0.56
CCNA1P78396 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.53■□□□□ 0.56
CCNA1P78396 MIR4321-201ENST00000592276 80 ntBASIC18.53■□□□□ 0.56
CCNA1P78396 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.53■□□□□ 0.56
CCNA1P78396 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCNA1P78396 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCNA1P78396 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCNA1P78396 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 LINC01144-201ENST00000626198 1710 ntBASIC18.52■□□□□ 0.56
CCNA1P78396 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCNA1P78396 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CCNA1P78396 AC098850.1-201ENST00000419919 790 ntBASIC18.52■□□□□ 0.56
CCNA1P78396 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.52■□□□□ 0.56
CCNA1P78396 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 AL512343.1-201ENST00000605837 169 ntBASIC18.52■□□□□ 0.56
CCNA1P78396 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 WFDC1-204ENST00000613603 549 ntBASIC18.52■□□□□ 0.56
CCNA1P78396 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.52■□□□□ 0.56
CCNA1P78396 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.52■□□□□ 0.56
CCNA1P78396 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCNA1P78396 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCNA1P78396 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCNA1P78396 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCNA1P78396 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.55
CCNA1P78396 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNA1P78396 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCNA1P78396 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCNA1P78396 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
CCNA1P78396 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNA1P78396 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.51■□□□□ 0.55
CCNA1P78396 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNA1P78396 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCNA1P78396 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNA1P78396 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.51■□□□□ 0.55
CCNA1P78396 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNA1P78396 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.51■□□□□ 0.55
CCNA1P78396 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCNA1P78396 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCNA1P78396 AC015936.2-201ENST00000593177 259 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms