Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.08■□□□□ 0.01
CDC42P60953 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC42P60953 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC42P60953 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.08■□□□□ 0.01
CDC42P60953 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC42P60953 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDC42P60953 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 OR2I1P-210ENST00000642037 4691 ntBASIC15.08■□□□□ 0
CDC42P60953 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.08■□□□□ 0
CDC42P60953 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDC42P60953 CHCHD2P8-201ENST00000429873 447 ntBASIC15.08■□□□□ 0
CDC42P60953 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.08■□□□□ 0
CDC42P60953 LINC01238-205ENST00000567549 1107 ntBASIC15.08■□□□□ 0
CDC42P60953 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.08■□□□□ 0
CDC42P60953 AL353135.1-201ENST00000606729 504 ntBASIC15.08■□□□□ 0
CDC42P60953 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 AC073592.4-201ENST00000623827 446 ntBASIC15.08■□□□□ 0
CDC42P60953 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.08■□□□□ 0
CDC42P60953 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.08■□□□□ 0
CDC42P60953 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.08■□□□□ 0
CDC42P60953 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42P60953 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.08■□□□□ 0
CDC42P60953 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.08■□□□□ 0
CDC42P60953 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.07■□□□□ 0
CDC42P60953 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDC42P60953 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.07■□□□□ 0
CDC42P60953 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDC42P60953 BX276092.5-203ENST00000456199 560 ntBASIC15.07■□□□□ 0
CDC42P60953 AC063952.2-201ENST00000498792 1227 ntBASIC15.07■□□□□ 0
CDC42P60953 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.07■□□□□ 0
CDC42P60953 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.07■□□□□ 0
CDC42P60953 AL121672.3-201ENST00000608644 468 ntBASIC15.07■□□□□ 0
CDC42P60953 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 MYO15B-237ENST00000642007 4893 ntBASIC15.07■□□□□ 0
CDC42P60953 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDC42P60953 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDC42P60953 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42P60953 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.07■□□□□ 0
CDC42P60953 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDC42P60953 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDC42P60953 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.06■□□□□ 0
CDC42P60953 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDC42P60953 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.06■□□□□ 0
CDC42P60953 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.06■□□□□ 0
CDC42P60953 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 RCN1P2-201ENST00000398357 915 ntBASIC15.06■□□□□ 0
CDC42P60953 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.06■□□□□ 0
CDC42P60953 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDC42P60953 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDC42P60953 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms