Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 HLA-L-209ENST00000420110 1011 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.15□□□□□ -0.14
AP3S2P59780 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.15□□□□□ -0.14
AP3S2P59780 MIR4785-201ENST00000585005 73 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 FAM87A-204ENST00000613235 858 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.15□□□□□ -0.14
AP3S2P59780 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.15□□□□□ -0.14
AP3S2P59780 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 AC132938.5-201ENST00000624980 1813 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
AP3S2P59780 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 AL512652.2-201ENST00000625156 1716 ntBASIC14.15□□□□□ -0.14
AP3S2P59780 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
AP3S2P59780 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
AP3S2P59780 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
AP3S2P59780 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
AP3S2P59780 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
AP3S2P59780 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
AP3S2P59780 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.14□□□□□ -0.15
AP3S2P59780 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.14□□□□□ -0.15
AP3S2P59780 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 AC136621.1-201ENST00000624017 2304 ntBASIC14.14□□□□□ -0.15
AP3S2P59780 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.14□□□□□ -0.15
AP3S2P59780 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP3S2P59780 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
AP3S2P59780 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.14□□□□□ -0.15
AP3S2P59780 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP3S2P59780 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms