Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RHBDL3P58872 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RHBDL3P58872 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
RHBDL3P58872 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.21■□□□□ 0.67
RHBDL3P58872 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RHBDL3P58872 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 AC087499.6-201ENST00000411576 835 ntBASIC19.21■□□□□ 0.67
RHBDL3P58872 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.21■□□□□ 0.67
RHBDL3P58872 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.21■□□□□ 0.67
RHBDL3P58872 AC245100.5-201ENST00000452108 331 ntBASIC19.21■□□□□ 0.67
RHBDL3P58872 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.21■□□□□ 0.67
RHBDL3P58872 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RHBDL3P58872 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RHBDL3P58872 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.21■□□□□ 0.67
RHBDL3P58872 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.21■□□□□ 0.67
RHBDL3P58872 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 AC011676.5-201ENST00000624864 2660 ntBASIC19.21■□□□□ 0.67
RHBDL3P58872 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RHBDL3P58872 ME2P1-201ENST00000426028 1970 ntBASIC19.21■□□□□ 0.67
RHBDL3P58872 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDL3P58872 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RHBDL3P58872 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDL3P58872 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RHBDL3P58872 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDL3P58872 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
RHBDL3P58872 AC244107.1-201ENST00000442033 332 ntBASIC19.2■□□□□ 0.66
RHBDL3P58872 AC055876.2-201ENST00000531834 546 ntBASIC19.2■□□□□ 0.66
RHBDL3P58872 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.2■□□□□ 0.66
RHBDL3P58872 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.2■□□□□ 0.66
RHBDL3P58872 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.2■□□□□ 0.66
RHBDL3P58872 AC074044.1-201ENST00000609673 707 ntBASIC19.2■□□□□ 0.66
RHBDL3P58872 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDL3P58872 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDL3P58872 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDL3P58872 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDL3P58872 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDL3P58872 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
RHBDL3P58872 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RHBDL3P58872 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 AC098614.1-201ENST00000368528 745 ntBASIC19.19■□□□□ 0.66
RHBDL3P58872 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 AC004987.2-201ENST00000395959 1148 ntBASIC19.19■□□□□ 0.66
RHBDL3P58872 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
RHBDL3P58872 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.19■□□□□ 0.66
RHBDL3P58872 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDL3P58872 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.19■□□□□ 0.66
RHBDL3P58872 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.19■□□□□ 0.66
RHBDL3P58872 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.19■□□□□ 0.66
RHBDL3P58872 TPRX2P-201ENST00000535362 881 ntBASIC19.19■□□□□ 0.66
RHBDL3P58872 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
RHBDL3P58872 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDL3P58872 AC099568.2-201ENST00000609194 695 ntBASIC19.19■□□□□ 0.66
RHBDL3P58872 IGHV3-72-202ENST00000621503 303 ntBASIC19.19■□□□□ 0.66
RHBDL3P58872 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms